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Publications
1995 | 1996 | 1997 | 1998 | 1999 | 2000 | 2001 | 2002 | 2003 | 2004 | 2005| 2006 | 2007
| 2008
2008
Cerqueira, G.C., Bartholomeu, D.C., Darocha, W.D., Hou, L., Freitas-Silva, D.M., Machado, C.R., El-Sayed, N.M., Teixeira, S.M. (2008) Sequence diversity and evolution of multigene families in Trypanosoma cruzi. Mol. Biochem. Parasitol. 157:65-72.
[PubMed]
2007
Bringaud, F., Müller, M., Cerqueira, G.C., Smith, M., Rochette, A., El-Sayed, N.M., Papadopoulou, B., Ghedin, E. (2007). Members of a large retroposon family are determinants of post-transcriptional gene expression in Leishmania. (2007). PLoS Pathog. 3:1291-307.
[PubMed]
Ghedin, E., Wang, S., Spiro, D., Caler, E., Zhao, Q., Crabtree, J., Allen, J.E., Delcher, A.L., Guiliano, D.B., Miranda-Saavedra, D., Angiuoli, S.V., Creasy, T., Amedeo, P., Haas, B., El-Sayed, N.M., Wortman, J.R., Feldblyum, T., Tallon, L., Schatz, M., Shumway, M., Koo, H., Salzberg, S.L., ., Williams, S.A., Fraser-Liggett, C., Slatko, B., Blaxter, M.L., Scott, A.L.(2007). Draft genome of the filarial nematode parasite Brugia malayi. Science 317:1756-60.
[PubMed]
Haas, B.J., Berriman, M., Hirai, H., Cerqueira, G.C, Loverde, P.T., El-Sayed, N.M. (2007). Schistosoma mansoni genome: Closing in on a final gene set. Exp Parasitol. 117:225-8.
[PubMed]
Waisberg, M., Lobo, F.P., Cerqueira, G.C., Passos, L.K., Carvalho, O.S., Franco, G.R., El-Sayed, N.M. (2007). Microarray analysis of gene expression induced by sexual contact in Schistosoma mansoni. BMC Genomics. 8:181.
[PubMed]
Souza, R.T., Santos, M.R.M., Lima, F.M., El-Sayed, N.M., Myler, P.J., Ruiz, J.C., da Silveira, J.F. (2007) New Trypanosoma cruzi repeated element that shows site specificity for insertion. Euk. Cell 6:1228-38.
[PubMed]
Stelter, K., El-Sayed, N.M., Seeber, F. (2007). The expression of a plant-type ferredoxin redox system provides molecular evidence for a plastid in the early dinoflagellate Perkinsus marinus. Protist 58:119-130.
[PubMed]
Djikeng, A., Raverdy, S., Foster, J., Bartholomeu, D., Zhang, Y., El-Sayed, N.M., Carlow, C. (2007). Cofactor-independent Phosphoglycerate Mutase is an essential gene in procyclic form Trypanosoma brucei. Parasitol. Res. 100:887-892.
[PubMed]
Attardo, G.M., Strickler-Dinglasan, P., Perkin, S.A., Caler, E., Bonaldo, M.F., Soares, M.B., El-Sayed, N.M., Aksoy, S. (2006). Analysis of fat body transcriptome from the adult tsetse fly, Glossina morsitans morsitans. Insect Mol. Bio. 15:411-424.
[PubMed]
2006
Westenberger, S.J., Cerqueira, G.C., El-Sayed, N.M., Zingales, B., Campbell, D.A., Sturm, N.R. (2006). Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and possess a conserved element in the non-coding region. BMC Genomics [Epub ahead of print]
[PubMed]
Baida, R.C., Santos, M.R., Carmo, M.S., Yoshida, N., Ferreira, D., Ferreira, A.T.,
El-Sayed, N.M., Andersson, B., da Silveira, J.F. (2006). Molecular characterization of serine-, alanine-,
and proline-rich proteins of Trypanosoma cruzi and their possible role in host cell infection.
Infect. Immun. 74:1537-46. [PubMed]
Wu, W., Niles, E.G.,
El-Sayed, N., Berriman, M., LoVerde, P. (2006). Schistosoma mansoni nuclear receptors: Sixteen new members and a novel subfamily. Gene 366:303-315. [Epub 2006 Jan 6][PubMed]
2005
Bringaud, F., Ghedin, E., Blandin, G., Bartholomeu, D., Levin,
M.J., Baltz, T., El-Sayed, N.M. (2005). Evolution of
non-LTR retrotransposons in the trypanosomatid genomes:Leishmania
major lost the active elements. Mol. Biochem.
Parasitol. [Epub 2005 Oct 10]
[PubMed]
Bringaud, F., Bartholomeu, D., Blandin, G., Delcher, A., Baltz,
T., El-Sayed, N.M., Ghedin, E. (2006). The Trypanosoma cruzi L1Tc and NARTc non-LTR
retrotransposons show relative site specificity for insertion.
Mol. Biol. Evol. 23:411-420. [Epub
2005 Nov 2] [PubMed]
MacLeod, A., Tweedie, A., McLellan, S., Taylor,
S., Hall, N., Berriman, M., El-Sayed, N.M., Hope, M.,
Turner, C.M.R., Tait, A. (2005). The genetic map and comparative
analysis with physical map of Trypanosoma brucei. Nuc.
Acids. Res. 33:6688-93. [Epub 2005 Nov 27] [PubMed]
Barry, J.D., Marcello, L., Morrison, L.J., Read, A.F., Lythgoe, K., Jones, N.,
Carrington, M., Blandin, G., Bohme, U., Caler, E., Hertz-Fowler, C., Renauld,
H., El-Sayed, N., Berriman, M. (2005). What the genome sequence is revealing
about trypanosome antigenic variation. Biochem. Soc. Trans. 33:986-9.
[PubMed]
El-Sayed N.M., Myler, P.J., Blandin, G., Berriman, M., Crabtree, J.,
Aggarwal, G., Caler, E., Renauld, H., Worthey, E.A., Hertz-Fowler, C., Ghedin,
E., Peacock, C., Bartholomeu, D.C., Haas, B.J., Tran, A.N., Wortman, J.R.,
Alsmark, U.C., Angiuoli, S., Anupama, A., Badger, J., Bringaud, F., Cadag,
E., Carlton, J.M., Cerqueira, G.C., Creasy, T., Delcher, A.L., Djikeng, A.,
Embley, T.M., Hauser, C., Ivens, A.C., Kummerfeld, S.K., Pereira-Leal, J.B.,
Nilsson, D., Peterson, J., Salzberg, S.L., Shallom, J., Silva, J.C., Sundaram,
J., Westenberger, S., White, O., Melville, S.E., Donelson, J.E., Andersson,
B., Stuart, K.D., Hall, N. (2005). Comparative genomics of trypanosomatid parasitic
protozoa. Science 309:404-409. [PubMed]
[Nature
Reviews Genetics Research Highlights] [J.
Clin. Invest. News]
El-Sayed N.M., Myler, P.J., Bartholomeu, D.C., Nilsson,
D., Aggarwal, G., Tran, A.N., Ghedin, E., Worthey, E.A., Delcher, A.L., Blandin,
G., Westenberger, S.J., Caler, E., Cerqueira, G.C., Branche, C., Haas, B.,
Anupama, A., Arner, E., Aslund, L., Attipoe, P., Bontempi, E., Bringaud,
F., Burton, P., Cadag, E., Campbell, D.A., Carrington, M., Crabtree, J.,
Darban, H., da Silveira, J.F., De Jong, P., Edwards, K., Englund, P.T., Fazelina,
G., Feldblyum, T., Ferella, M., Frasch, A.C., Gull, K., Horn, D., Hou, L.,
Huang, Y., Kindlund, E., Klingbeil, M., Kluge, S., Koo, H., Lacerda, D.,
Levin, M.J., Lorenzi, H., Louie, T., Machado, C.R., McCulloch, R., McKenna,
A., Mizuno, Y., Mottram, J.C., Nelson, S., Ochaya, S., Osoegawa, K., Pai,
G., Parsons, M., Pentony, M., Pettersson, U., Pop, M., Ramirez, J.L., Rinta,
J., Robertson, L., Salzberg, S.L., Sanchez, D.O., Seyler, A., Sharma, R.,
Shetty, J., Simpson, A.J., Sisk, E., Tammi, M.T., Tarleton, R., Teixeira,
S., Van Aken, S., Vogt, C., Ward, P.N., Wickstead, B., Wortman, J., White,
O., Fraser, C.M., Stuart, K.D., Andersson, B. (2005). The genome sequence
of Trypanosoma cruzi, etiologic agent of Chagas disease. Science 309:409-415.
[PubMed]
[Faculty
1000 Exceptional]
[ESI Fast Moving Front]
Berriman M., Ghedin, E., Hertz-Fowler, C., Blandin, G., Renauld, H., Bartholomeu,
D.C., Lennard, N.J., Caler, E., Hamlin, N.E., Haas, B., Bohme, U., Hannick,
L., Aslett, M,A., Shallom, J., Marcello, L., Hou, L., Wickstead, B., Alsmark,
U.C., Arrowsmith, C., Atkin, R.J., Barron, A.J., Bringaud, F., Brooks, K.,
Carrington, M., Cherevach, I., Chillingworth, T.J., Churcher, C., Clark, L.N.,
Corton, C.H., Cronin, A., Davies, R.M., Doggett, J., Djikeng, A., Feldblyum,
T., Field, M.C., Fraser, A., Goodhead, I., Hance, Z., Harper, D., Harris, B.R.,
Hauser, H., Hostetler, J., Ivens, A., Jagels, K., Johnson, D., Johnson, J.,
Jones, K., Kerhornou, A.X., Koo, H., Larke, N., Landfear, S., Larkin, C., Leech,
V., Line, A., Lord, A., Macleod, A., Mooney, P.J., Moule, S., Martin, D.M.,
Morgan, G.W., Mungall, K., Norbertczak, H., Ormond, D., Pai, G., Peacock, C.S.,
Peterson, J., Quail, M.A., Rabbinowitsch, E., Rajandream, M.A., Reitter, C.,
Salzberg, S.L., Sanders, M., Schobel, S., Sharp, S., Simmonds, M., Simpson,
A.J., Tallon, L., Turner, C.M., Tait, A., Tivey, A.R., Van Aken, S., Walker,
D., Wanless, D., Wang, S., White, B., White, O., Whitehead, S., Woodward, J.,
Wortman. J., Adams, M.D., Embley, T.M., Gull, K., Ullu, E., Barry, J.D., Fairlamb,
A.H., Opperdoes, F., Barrell, B.G., Donelson, J.E., Hall, N., Fraser, C.M.,
Melville, S.E., El-Sayed N.M. (2005). The genome of the African trypanosome Trypanosoma
brucei. Science 309:416-22. [PubMed]
[Faculty
1000 Exceptional]
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Boonyaratanakornkit, B.B., Simpson, A.J., Whitehead,
T.A., Fraser, C.M., El-Sayed, N.M. and Clark, D.S. 2005.
Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus
jannaschii in response to lethal heat and non-lethal cold
shock. Environ. Microbiol.7:789-797.
[PubMed]
Ouhammouch, M., Langham, G.E.,Hausner, W., Simpson, A.J., El-Sayed,
N.M. & Geidushek, P. 2005. Promoter architecture and
response to a positive regulator of archaeal transcription. Mol.
Microbiol. 56:625-637. [PubMed]
Loftus, B., Anderson, I., Davies, R., Alsmark, U.C., Samuelson, J., Amedeo, P.,
Roncaglia, P., Berriman, M., Hirt, R.P., Mann, B.J., Nozaki, T., Suh, B., Pop,
M., Duchene, M., …[25 authors]…, Stroup, S.E., Bhattacharya, S.,
Lohia, A., Foster, P.G., Sicheritz-Ponten, T., Weber, C., Singh, U., Mukherjee,
C., El-Sayed, N.M., Petri, W.A. Jr, Clark, C.G., Embley,
T.M., Barrell, B., Fraser, C.M., Hall, N. 2005. The genome of the protist parasite Entamoeba
histolytica. Nature 433:865-868. [PubMed]
Kim, D., Chiurillo, M.A., El-Sayed, N.M., Jones, K.,
Santos, M.R.M, Cerda, P.P., Andersson, B, Myler, P., da Silveira, J.F. & Ramirez,
J.L. 2005. Telomere and subtelomere of Trypanosoma cruzi chromosomes
are enriched in (pseudo)genes of retrotransposon hot spot and transialidase-like
gene families: the origins of T. cruzi telomeres. Gene 346:153-161.
[PubMed]
2004
Bartholomeu, D., El-Sayed, N.M.A. 2004. Sequencing Strategies
for Parasite Genomes in Parasite Genomics Methods and Protocols – Methods
in Molecular Biology (Melville, S.A, ed.). Humana Press.
El-Sayed, N.M.A., Bartholomeu, D., Ivens,
A., Johnston, D.A., LoVerde, P.T. 2004. Advances in Schistosoma genomics. Trends
Parasitol. 20:154-157. [PubMed]
LoVerde, P.T., Hirai, H., Merrick, J.M., Lee, N.H., El-Sayed, N.M.A. 2004.
Schistosoma mansoni genome project: an update. Parasitol Int. 53:183-192.
[PubMed]
Ghedin, E., Bringaud, F., Peterson, J., Myler, P., Berriman, M., Ivens, A., Andersson,
B., Bontempi, E., Eisen, J., Angiuoli, S., Wanless, D., Von Arx, A., Murphy,
L., Lennard, N., Salzberg, S., Adams, M.D., White, O., Hall, N., Stuart, K.,
Fraser, C.M., El-Sayed, N.M.A. 2004. Gene synteny and evolution of genome
architecture in trypanosomatids. Mol. Biochem. Parasitol. 134:183-191.
[PubMed]
Bringaud, F., Biteau, N., Zuiderwijk, Berriman, M., El-Sayed, N.M.A., Ghedin,
E., Melville, S.A., Hall, N. and T. Baltz. 2004. The ingi and RIME non-LTR retrotransposons
are not randomly distributed in the genome of Trypanosoma brucei. Mol.
Biol. Evol. 21:520-528.[PubMed]
2003
El-Sayed,N.M.A., Ghedin,E., Song,J., MacLeod,A.,
Bringaud,F., Larkin,C., Wanless,D., Peterson,J., Hou,L.,
Taylor,S., Tweedie,A., Biteau,N., Khalak,H.G., Lin,X., Mason,T.,
Hannick,L., Caler,E., Blandin,G., Bartholomeu,D., Simpson,A.J.,
Kaul,S., Zhao,H., Pai,G., Van Aken,S., Utterback,T., Haas,B.,
Koo,H.L., Umayam,L., Suh,B., Gerrard,C., Leech,V., Qi,R.,
Zhou,S., Schwartz,D., Feldblyum,T., Salzberg,S., Tait,A.,
Turner,C.M., Ullu,E., White,O., Melville,S., Adams,M.D.,
Fraser,C.M., Donelson,J.E. 2003. The sequence and analysis
of Trypanosoma brucei chromosome II. Nucleic
Acids Res. 31:4856-4863. [PubMed]
[Faculty
of 1000 Must Read]
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2002
Bartholomeu, D.C., Silva, R.A., Galvão, L.M.C., El-Sayed, N.M.A., Donelson,
J.E. and S.M. Teixeira. 2002. Trypanosoma cruzi: RNA Structure and Post-Transcriptional
Control of Tubulin Gene Expression Exp. Parasitol. 102:123-133. [PubMed]
Bringaud, F. Garcia-Pérez, J.L., Heras, S.R., Ghedin, E., El-Sayed,
N.M., Andersson, B., Baltz, T., Lopez, M.C. 2002. Indentification of
non-autonomous non-LTR retroposons in the genome of Trypanosoma cruzi. Mol.
Biochem. Parasitol. 124:73-78. [PubMed]
Bringaud, F., Biteau, N., Melville, S.E., Hez, S., El-Sayed, N.M., Leech,
V., Berriman, M., Hall, N., Donelson, J.E. and Baltz, T. 2002. A new expressed
multigene family containing a hot spot of insertion for retroelements is associated
with polymorphic subtelomeric regions of Trypanosoma brucei. Euk. Cell 1:137-151.
[PubMed]
Diehl, S., Diehl, F., El-Sayed, N.M.A., Clayton,
C. and Hoheisel, J.D. 2002. Analysis of stage-specific gene
expression in the bloodstream and
the procyclic form of Trypanosoma brucei using a genomic DNA-microarray. Mol.
Biochem. Parasitol. 123:115-123. [PubMed]
2001
LaCount, D.J., El-Sayed, N.M., Kaul, S., Wanless, D., Turner,
C.M.R., Donelson, J.E. 2001. Analysis of a donor VSG and its expression site
in African trypanosomes. Nucleic Acids Res. 29:2012-9. [PubMed]
2000
El-Sayed, N.M.A., Hegde, P., Quackenbush,
J., Melville, S.E., and Donelson, J.E. 2000. The African trypanosome
genome. International J. Parasitol 30:329-345. [PubMed]
1999
Donelson, J.E., Hill, K.L. and El-Sayed, N.M.A. 1999. Multiple
mechanisms of immune evasion by African trypanosomes. In The Trypanosome Surface
(Pays, E., ed.). De Boeck & Larcier s.a., Brussels, Belgium, pp. 71-91.
Donelson, J.E., Gardner, M.J., El-Sayed, N.M. 1999. More surprises
from Kinetoplastida. Proc. Natl. Acad. Sci. USA 96:2579-2581. [PubMed]
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1998
Clayton, C., Adams, M., Almeida, R., Baltz, T., ..., Donelson, J., El-Sayed,
N., ...., Ullu, E. and Vanhamme, L. 1998. Genetic nomenclature of Trypanosoma and Leishmania. Mol
Biochem Parasitol. 97: 221-224. [PubMed]
Donelson, J.E., Hill, K.L. and El-Sayed, N.M.A. 1998. Multiple
mechanisms of immune evasion by African trypanosomes. Mol. Biochem. Parasitol. 91:
51-66. [PubMed]
1997
El-Sayed, N.M.A. and Donelson, J.E. 1997.
African trypanosomes have differentially expressed genes encoding
homologues of the Leishmania GP63 surface protease. J.
Biol. Chem. 272: 26742-26748. [PubMed]
El-Sayed, N.M.A. and Donelson, J.E. 1997.
A survey of the Trypanosoma brucei rhodesiense genome using
shotgun sequencing. Mol. Biochem. Parasitol. 84: 167-178.
[PubMed]
El-Sayed, N.M.A. and Donelson, J.E. 1997.
Sequencing and mapping the African trypanosome genome. In Trypanosomiasis and Leishmaniasis:
Biology and Control (Hide, G., Mottram, J.C., Coombs, G.H.,
Holmes, P.H., eds.). CAB International and the British Society
for Parasitology pubs., pp 51-63.
1996
Morgan, R.W., El-Sayed, N.M.A., Kepa, J.K., Pedram, M. and Donelson,
J.E. 1996. Differential expression of the expression site-associated gene I family
in African trypanosomes. J.Biol. Chem. 271: 9771-9777. [PubMed]
1995
El-Sayed, N.M.A., Alarcon, C.M., Beck, J.C.,
Sheffield, V.C. and Donelson, J.E. 1995. cDNA expressed sequence
tags of Trypanosoma brucei rhodesiense provide new insights
into the biology of the parasite. Mol. Biochem. Parasitol. 73:
75-90. [PubMed]
El-Sayed, N.M.A., Harkins, P.C., Fox, R.O.,
Anderson, K. and Patton, C.L. 1995. Crystallization and preliminary
X-ray investigation of the recombinant Trypanosoma brucei
rhodesiense calmodulin. Proteins 21:354-357. [PubMed] |
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