1995 | 1996 | 1997 | 1998 | 1999 | 2000 | 2001 | 2002 | 2003 | 2004 | 2005| 2006 | 2007
| 2008 | 2009
2009
Ittiprasert, W., Miller, A., Myers, J., Nene, V., El-Sayed, N.M., Knight, M. (2009) Identification of immediate response genes dominantly expressed in juvenile resistant and susceptible Biomphalaria glabrata snails upon exposure to Schistosoma mansoni. Mol. Biochem. Parasitol. (in press)
Berriman, M., Haas, B.J., LoVerde, P.T., Wilson, R.A., Dillon, G.P., Cerqueira, G.C., Mashiyama, S.T., Al-Lazikani, B., Andrade, L.F., Ashton, P.D., Aslett, M.A., Bartholomeu, D.C., Blandin, G., Caffrey, C.R., Coghlan, A., Coulson, R., Day, T.A., Delcher, A., DeMarco, R., Djikeng, A., Eyre, T., Gamble, J.A., Ghedin, E., Gu, Y., Hertz-Fowler, C., Hirai, H., Hirai, Y., Houston, R., Ivens, A., Johnston, D.A., Lacerda, D., Macedo, C.D., McVeigh, P., Ning, Z., Oliveira, G., Overington, J.P., Parkhill, J., Pertea, M., Pierce, R.J., Protasio, A.V., Quail, M.A., Rajandream, M.A., Rogers, J., Sajid, M., Salzberg, S.L., Stanke, M., Tivey, A.R., White, O., Williams, D.L., Wortman, J., Wu, W., Zamanian, M., Zerlotini, A., Fraser-Liggett, C.M., Barrell, B.G., El-Sayed, N.M. (2009) The genome of the blood fluke Schistosoma mansoni. Nature 460:352-358.[View Article in July 16 2009 issue of Nature] [PubMed] [Faculty 1000 Must Read] [This work in the news]
Marbach-Ad, G., Briken, V., El-Sayed, N.M., Frauwirth, K., Fredericksen, B., Hutcheson, S., Gao, L.Y., Joseph, S., Lee, V.T., McIver, K.S., Mosser, D., Quimby, B.B., Shields, P., Song, W., Stein, D.C., Yuan, R.T., Smith, A.C. (2009) Assessing Student Understanding of Host Pathogen Interactions Using a Concept Inventory. J. Microbiol. Biol. Ed. 10:43-50.
Bartholomeu, D.C., Cerqueira, G.C., Leao, A.C.A., daRocha, W.D., Pais, F.S., Macedo, C., Djikeng, A., Teixeira, S.M.R., El-Sayed, N.M. (2009) Genomic organization and expression profile of the mucin-associated surface protein (masp) family of the human pathogen Trypanosoma cruzi. Nucleic Acids Res. 37:3407-17. [Download from NAR/Oxford Journals][PubMed]
2008
Waisberg, M., Lobo, F.P., Cerqueira, G.C., Passos, L.K., Carvalho, O.S., El-Sayed, N.M., Franco, G.R. (2008) Schistosoma mansoni: Microarray analysis of gene expression induced by host sex. Exp. Parasitol. 120:357-63. [PubMed]
Bringaud, F., Ghedin, E., El-Sayed, N.M., Papadopoulou, B. (2008) Role of transposable elements in trypanosomatids. Microbes Infect. 10:575-81. [PubMed]
Cerqueira, G.C., Bartholomeu, D.C., Darocha, W.D., Hou, L., Freitas-Silva, D.M., Machado, C.R., El-Sayed, N.M., Teixeira, S.M. (2008) Sequence diversity and evolution of multigene families in Trypanosoma cruzi. Mol. Biochem. Parasitol. 157:65-72.
[PubMed]
2007
Bringaud, F., Müller, M., Cerqueira, G.C., Smith, M., Rochette, A., El-Sayed, N.M., Papadopoulou, B., Ghedin, E. (2007). Members of a large retroposon family are determinants of post-transcriptional gene expression in Leishmania. (2007). PLoS Pathog. 3:1291-307.
[PubMed]
Ghedin, E., Wang, S., Spiro, D., Caler, E., Zhao, Q., Crabtree, J., Allen, J.E., Delcher, A.L., Guiliano, D.B., Miranda-Saavedra, D., Angiuoli, S.V., Creasy, T., Amedeo, P., Haas, B., El-Sayed, N.M., Wortman, J.R., Feldblyum, T., Tallon, L., Schatz, M., Shumway, M., Koo, H., Salzberg, S.L., ?, Williams, S.A., Fraser-Liggett, C., Slatko, B., Blaxter, M.L., Scott, A.L.(2007). Draft genome of the filarial nematode parasite Brugia malayi. Science 317:1756-60.
[PubMed]
Haas, B.J., Berriman, M., Hirai, H., Cerqueira, G.C, Loverde, P.T., El-Sayed, N.M. (2007). Schistosoma mansoni genome: Closing in on a final gene set. Exp Parasitol. 117:225-8.
[PubMed]
Waisberg, M., Lobo, F.P., Cerqueira, G.C., Passos, L.K., Carvalho, O.S., Franco, G.R., El-Sayed, N.M. (2007). Microarray analysis of gene expression induced by sexual contact in Schistosoma mansoni. BMC Genomics. 8:181.
[PubMed]
Souza, R.T., Santos, M.R.M., Lima, F.M., El-Sayed, N.M., Myler, P.J., Ruiz, J.C., da Silveira, J.F. (2007) New Trypanosoma cruzi repeated element that shows site specificity for insertion. Euk. Cell 6:1228-38.
[PubMed]
Stelter, K., El-Sayed, N.M., Seeber, F. (2007). The expression of a plant-type ferredoxin redox system provides molecular evidence for a plastid in the early dinoflagellate Perkinsus marinus. Protist 58:119-130.
[PubMed]
Djikeng, A., Raverdy, S., Foster, J., Bartholomeu, D., Zhang, Y., El-Sayed, N.M., Carlow, C. (2007). Cofactor-independent Phosphoglycerate Mutase is an essential gene in procyclic form Trypanosoma brucei. Parasitol. Res. 100:887-892.
[PubMed]
Attardo, G.M., Strickler-Dinglasan, P., Perkin, S.A., Caler, E., Bonaldo, M.F., Soares, M.B., El-Sayed, N.M., Aksoy, S. (2006). Analysis of fat body transcriptome from the adult tsetse fly, Glossina morsitans morsitans. Insect Mol. Bio. 15:411-424.
[PubMed]
2006
Westenberger, S.J., Cerqueira, G.C., El-Sayed, N.M., Zingales, B., Campbell, D.A., Sturm, N.R. (2006). Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and possess a conserved element in the non-coding region. BMC Genomics [Epub ahead of print]
[PubMed]
Baida, R.C., Santos, M.R., Carmo, M.S., Yoshida, N., Ferreira, D., Ferreira, A.T.,
El-Sayed, N.M., Andersson, B., da Silveira, J.F. (2006). Molecular characterization of serine-, alanine-,
and proline-rich proteins of Trypanosoma cruzi and their possible role in host cell infection.
Infect. Immun. 74:1537-46. [PubMed]
Wu, W., Niles, E.G.,
El-Sayed, N., Berriman, M., LoVerde, P. (2006). Schistosoma mansoni nuclear receptors: Sixteen new members and a novel subfamily. Gene 366:303-315. [Epub 2006 Jan 6][PubMed]
2005
Bringaud, F., Ghedin, E., Blandin, G., Bartholomeu, D., Levin,
M.J., Baltz, T., El-Sayed, N.M. (2005). Evolution of
non-LTR retrotransposons in the trypanosomatid genomes:Leishmania
major lost the active elements. Mol. Biochem.
Parasitol. [Epub 2005 Oct 10]
[PubMed]
Bringaud, F., Bartholomeu, D., Blandin, G., Delcher, A., Baltz,
T., El-Sayed, N.M., Ghedin, E. (2006). The Trypanosoma cruzi L1Tc and NARTc non-LTR
retrotransposons show relative site specificity for insertion.
Mol. Biol. Evol. 23:411-420. [Epub
2005 Nov 2] [PubMed]
MacLeod, A., Tweedie, A., McLellan, S., Taylor,
S., Hall, N., Berriman, M., El-Sayed, N.M., Hope, M.,
Turner, C.M.R., Tait, A. (2005). The genetic map and comparative
analysis with physical map of Trypanosoma brucei. Nuc.
Acids. Res. 33:6688-93. [Epub 2005 Nov 27] [PubMed]
Barry, J.D., Marcello, L., Morrison, L.J., Read, A.F., Lythgoe, K., Jones, N.,
Carrington, M., Blandin, G., Bohme, U., Caler, E., Hertz-Fowler, C., Renauld,
H., El-Sayed, N., Berriman, M. (2005). What the genome sequence is revealing
about trypanosome antigenic variation. Biochem. Soc. Trans. 33:986-9.
[PubMed]
El-Sayed N.M., Myler, P.J., Blandin, G., Berriman, M., Crabtree, J.,
Aggarwal, G., Caler, E., Renauld, H., Worthey, E.A., Hertz-Fowler, C., Ghedin,
E., Peacock, C., Bartholomeu, D.C., Haas, B.J., Tran, A.N., Wortman, J.R.,
Alsmark, U.C., Angiuoli, S., Anupama, A., Badger, J., Bringaud, F., Cadag,
E., Carlton, J.M., Cerqueira, G.C., Creasy, T., Delcher, A.L., Djikeng, A.,
Embley, T.M., Hauser, C., Ivens, A.C., Kummerfeld, S.K., Pereira-Leal, J.B.,
Nilsson, D., Peterson, J., Salzberg, S.L., Shallom, J., Silva, J.C., Sundaram,
J., Westenberger, S., White, O., Melville, S.E., Donelson, J.E., Andersson,
B., Stuart, K.D., Hall, N. (2005). Comparative genomics of trypanosomatid parasitic
protozoa. Science 309:404-409. [PubMed]
[Nature
Reviews Genetics Research Highlights] [J.
Clin. Invest. News]
El-Sayed N.M., Myler, P.J., Bartholomeu, D.C., Nilsson,
D., Aggarwal, G., Tran, A.N., Ghedin, E., Worthey, E.A., Delcher, A.L., Blandin,
G., Westenberger, S.J., Caler, E., Cerqueira, G.C., Branche, C., Haas, B.,
Anupama, A., Arner, E., Aslund, L., Attipoe, P., Bontempi, E., Bringaud,
F., Burton, P., Cadag, E., Campbell, D.A., Carrington, M., Crabtree, J.,
Darban, H., da Silveira, J.F., De Jong, P., Edwards, K., Englund, P.T., Fazelina,
G., Feldblyum, T., Ferella, M., Frasch, A.C., Gull, K., Horn, D., Hou, L.,
Huang, Y., Kindlund, E., Klingbeil, M., Kluge, S., Koo, H., Lacerda, D.,
Levin, M.J., Lorenzi, H., Louie, T., Machado, C.R., McCulloch, R., McKenna,
A., Mizuno, Y., Mottram, J.C., Nelson, S., Ochaya, S., Osoegawa, K., Pai,
G., Parsons, M., Pentony, M., Pettersson, U., Pop, M., Ramirez, J.L., Rinta,
J., Robertson, L., Salzberg, S.L., Sanchez, D.O., Seyler, A., Sharma, R.,
Shetty, J., Simpson, A.J., Sisk, E., Tammi, M.T., Tarleton, R., Teixeira,
S., Van Aken, S., Vogt, C., Ward, P.N., Wickstead, B., Wortman, J., White,
O., Fraser, C.M., Stuart, K.D., Andersson, B. (2005). The genome sequence
of Trypanosoma cruzi, etiologic agent of Chagas disease. Science 309:409-415.
[PubMed]
[Faculty
1000 Exceptional]
[ESI Fast Moving Front]
Berriman M., Ghedin, E., Hertz-Fowler, C., Blandin, G., Renauld, H., Bartholomeu,
D.C., Lennard, N.J., Caler, E., Hamlin, N.E., Haas, B., Bohme, U., Hannick,
L., Aslett, M,A., Shallom, J., Marcello, L., Hou, L., Wickstead, B., Alsmark,
U.C., Arrowsmith, C., Atkin, R.J., Barron, A.J., Bringaud, F., Brooks, K.,
Carrington, M., Cherevach, I., Chillingworth, T.J., Churcher, C., Clark, L.N.,
Corton, C.H., Cronin, A., Davies, R.M., Doggett, J., Djikeng, A., Feldblyum,
T., Field, M.C., Fraser, A., Goodhead, I., Hance, Z., Harper, D., Harris, B.R.,
Hauser, H., Hostetler, J., Ivens, A., Jagels, K., Johnson, D., Johnson, J.,
Jones, K., Kerhornou, A.X., Koo, H., Larke, N., Landfear, S., Larkin, C., Leech,
V., Line, A., Lord, A., Macleod, A., Mooney, P.J., Moule, S., Martin, D.M.,
Morgan, G.W., Mungall, K., Norbertczak, H., Ormond, D., Pai, G., Peacock, C.S.,
Peterson, J., Quail, M.A., Rabbinowitsch, E., Rajandream, M.A., Reitter, C.,
Salzberg, S.L., Sanders, M., Schobel, S., Sharp, S., Simmonds, M., Simpson,
A.J., Tallon, L., Turner, C.M., Tait, A., Tivey, A.R., Van Aken, S., Walker,
D., Wanless, D., Wang, S., White, B., White, O., Whitehead, S., Woodward, J.,
Wortman. J., Adams, M.D., Embley, T.M., Gull, K., Ullu, E., Barry, J.D., Fairlamb,
A.H., Opperdoes, F., Barrell, B.G., Donelson, J.E., Hall, N., Fraser, C.M.,
Melville, S.E., El-Sayed N.M. (2005). The genome of the African trypanosome Trypanosoma
brucei. Science 309:416-22. [PubMed]
[Faculty
1000 Exceptional]
|
Boonyaratanakornkit, B.B., Simpson, A.J., Whitehead,
T.A., Fraser, C.M., El-Sayed, N.M. and Clark, D.S. 2005.
Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus
jannaschii in response to lethal heat and non-lethal cold
shock. Environ. Microbiol.7:789-797.
[PubMed]
Ouhammouch, M., Langham, G.E.,Hausner, W., Simpson, A.J., El-Sayed,
N.M. & Geidushek, P. 2005. Promoter architecture and
response to a positive regulator of archaeal transcription. Mol.
Microbiol. 56:625-637. [PubMed]
Loftus, B., Anderson, I., Davies, R., Alsmark, U.C., Samuelson, J., Amedeo, P.,
Roncaglia, P., Berriman, M., Hirt, R.P., Mann, B.J., Nozaki, T., Suh, B., Pop,
M., Duchene, M., …[25 authors]…, Stroup, S.E., Bhattacharya, S.,
Lohia, A., Foster, P.G., Sicheritz-Ponten, T., Weber, C., Singh, U., Mukherjee,
C., El-Sayed, N.M., Petri, W.A. Jr, Clark, C.G., Embley,
T.M., Barrell, B., Fraser, C.M., Hall, N. 2005. The genome of the protist parasite Entamoeba
histolytica. Nature 433:865-868. [PubMed]
Kim, D., Chiurillo, M.A., El-Sayed, N.M., Jones, K.,
Santos, M.R.M, Cerda, P.P., Andersson, B, Myler, P., da Silveira, J.F. & Ramirez,
J.L. 2005. Telomere and subtelomere of Trypanosoma cruzi chromosomes
are enriched in (pseudo)genes of retrotransposon hot spot and transialidase-like
gene families: the origins of T. cruzi telomeres. Gene 346:153-161.
[PubMed]
2004
Bartholomeu, D., El-Sayed, N.M.A. 2004. Sequencing Strategies
for Parasite Genomes in Parasite Genomics Methods and Protocols – Methods
in Molecular Biology (Melville, S.A, ed.). Humana Press.
El-Sayed, N.M.A., Bartholomeu, D., Ivens,
A., Johnston, D.A., LoVerde, P.T. 2004. Advances in Schistosoma genomics. Trends
Parasitol. 20:154-157. [PubMed]
LoVerde, P.T., Hirai, H., Merrick, J.M., Lee, N.H., El-Sayed, N.M.A. 2004.
Schistosoma mansoni genome project: an update. Parasitol Int. 53:183-192.
[PubMed]
Ghedin, E., Bringaud, F., Peterson, J., Myler, P., Berriman, M., Ivens, A., Andersson,
B., Bontempi, E., Eisen, J., Angiuoli, S., Wanless, D., Von Arx, A., Murphy,
L., Lennard, N., Salzberg, S., Adams, M.D., White, O., Hall, N., Stuart, K.,
Fraser, C.M., El-Sayed, N.M.A. 2004. Gene synteny and evolution of genome
architecture in trypanosomatids. Mol. Biochem. Parasitol. 134:183-191.
[PubMed]
Bringaud, F., Biteau, N., Zuiderwijk, Berriman, M., El-Sayed, N.M.A., Ghedin,
E., Melville, S.A., Hall, N. and T. Baltz. 2004. The ingi and RIME non-LTR retrotransposons
are not randomly distributed in the genome of Trypanosoma brucei. Mol.
Biol. Evol. 21:520-528.[PubMed]
2003
El-Sayed,N.M.A., Ghedin,E., Song,J., MacLeod,A.,
Bringaud,F., Larkin,C., Wanless,D., Peterson,J., Hou,L.,
Taylor,S., Tweedie,A., Biteau,N., Khalak,H.G., Lin,X., Mason,T.,
Hannick,L., Caler,E., Blandin,G., Bartholomeu,D., Simpson,A.J.,
Kaul,S., Zhao,H., Pai,G., Van Aken,S., Utterback,T., Haas,B.,
Koo,H.L., Umayam,L., Suh,B., Gerrard,C., Leech,V., Qi,R.,
Zhou,S., Schwartz,D., Feldblyum,T., Salzberg,S., Tait,A.,
Turner,C.M., Ullu,E., White,O., Melville,S., Adams,M.D.,
Fraser,C.M., Donelson,J.E. 2003. The sequence and analysis
of Trypanosoma brucei chromosome II. Nucleic
Acids Res. 31:4856-4863. [PubMed]
[Faculty
of 1000 Must Read]
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